BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A06LP1|AL427239
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 1742 0.0
>3x_Contig1574
Length = 8021
Score = 1742 bits (877), Expect = 0.0
Identities = 886/889 (99%), Gaps = 1/889 (0%)
Strand = Plus / Minus
Query: 1 gggtgacggttattctggatatggaaatggcttcagtaacgatctcacaaggattcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 gggtgacggttattctggatatggaaatggcttcagtaacgatctcacaaggattcaagt 1282
Query: 61 cgatgacacttatgaaatgcacttggacgaaatatatgaatggacaatgaatcaaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 cgatgacacttatgaaatgcacttggacgaaatatatgaatggacaatgaatcaaacagg 1222
Query: 121 ggaggaactagtacctgttagattagagtttgatgcagaaaaggataaatttactttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 ggaggaactagtacctgttagattagagtttgatgcagaaaaggataaatttactttgag 1162
Query: 181 ggacacattcgtatggaacagatcagacacgctactgtcaatcaacgaatttgtgaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 ggacacattcgtatggaacagatcagacacgctactgtcaatcaacgaatttgtgaaaac 1102
Query: 241 aacgctgaaggattataggctcaaagtcaccacggagatgtatcaacagattgtgaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 aacgctgaaggattataggctcaaagtcaccacggagatgtatcaacagattgtgaatag 1042
Query: 301 tatcaaagaacaacttcaagaatatactccaaatccttttgaaaatgtgcagaggttcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 tatcaaagaacaacttcaagaatatactccaaatccttttgaaaatgtgcagaggttcgg 982
Query: 361 gggcgatgatttcagaataaaaatcaacctagatattgtcgttggacaacatcaattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 gggcgatgatttcagaataaaaatcaacctagatattgtcgttggacaacatcaattgat 922
Query: 421 agataccgttgaatgggatgtgtcaaatccagataattgtccagaatcgttcgcggagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 agataccgttgaatgggatgtgtcaaatccagataattgtccagaatcgttcgcggagtg 862
Query: 481 tttatgcgaagaactatcccttccgggtgaattcttaacagcaattgcacattgcattag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tttatgcgaagaactatcccttccgggtgaattcttaacagcaattgcacattgcattag 802
Query: 541 agaacaagttcacatgtatcacaagtcattatatatggttggttacaaatttgacggtag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaacaagttcacatgtatcacaagtcattatatatggttggttacaaatttgacggtag 742
Query: 601 ccccgttgaagaagacgatatcagaacaagattcttgcctgtwctcaccttagcagacgt 660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 741 ccccgttgaagaagacgatatcagaacaagattcttgcctgtactcaccttagcagacgt 682
Query: 661 aatgagaccacaaaaggatacgtttttatacacacctaacttattacagatatctcccgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgagaccacaaaaggatacgtttttatacacacctaacttattacagatatctcccgc 622
Query: 721 agaactagaacgtttggttaaggataaggacagagacactagaaggaaacgtagacaagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaactagaacgtttggttaaggataaggacagagacactagaaggaaacgtagacaagt 562
Query: 781 tcgtttcaatagaagaggcaatacagaaaatcacccatcgtccggragtacaccgcaact 840
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tcgtttcaatagaagaggcaatacagaaaatcacccatcgtccggaagtacaccgcaact 502
Query: 841 accccatgatgcagaacttcctgatcttggggatat-ccaaaaacgtgc 888
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 accccatgatgcagaacttcctgatcttggggatatcccaaaaacgtgc 453
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6334
Number of Sequences: 1807
Number of extensions: 6334
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)